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View Structure Prediction Details

Protein: GH31_ARATH
Organism: Arabidopsis thaliana
Length: 590 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GH31_ARATH.

Description E-value Query
Range
Subject
Range
gi|4887010 - gi|4887010|gb|AAD32141.1|AF123503_1 Nt-gh3 deduced protein [Nicotiana tabacum]
945.0 [0..1] [588..1]

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Predicted Domain #1
Region A:
Residues: [1-590]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVDSNLSSP LGPPACEKDA KALRFIEEMT RNADTVQENL LAEILARNAD TEYLRRFNLC  60
   61 GATDRDTFKT KIPVITYEDL QPEIQRIADG DRSPILSAHP ISEFLTSSGT SAGERKLMPT 120
  121 IKEELDRRQL LYSLLMPVMN LYVPGLDKGK GMYFLFVKSE TKTPGGLPAR PVLTSYYKSE 180
  181 HFRSRPYDPY NVYTSPNEAI LCPDSFQSMY TQMLCGLLDR LSVLRVGAVF ASGLLRAIRF 240
  241 LQLHWSRFAH DIELGCLDSE ITDPSIRQCM SGILKPDPVL AEFIRRECKS DNWEKIITRI 300
  301 WPNTKYLDVI VTGAMAQYIP TLEYYSGGLP MACTMYASSE CYFGLNLNPM SKPSEVSYTI 360
  361 MPNMAYFEFI PLGGTKAVEL VDVNIGKEYE LVVTTYAGLC RYRVGDILRV TGFHNSAPQF 420
  421 HFVRRKNVLL SIDSDKTDES ELQKAVENAS SILHEECGSR VAEYTSYADT STIPGHYVLY 480
  481 WELLVRDGAR QPSHETLTRC CLGMEESLNS VYRQSRVADN SVGPLEIRVV RNGTFEELMD 540
  541 YAISRGASIN QYKVPRCVNF TPIVELLDSR VVSAHFSPSL PHWTPERRRR 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.22
Match: 1amuA
Description: Phenylalanine activating domain of gramicidin synthetase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.927181813624701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle