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View Structure Prediction Details

Protein: DTX18_ARATH
Organism: Arabidopsis thaliana
Length: 469 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX18_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
321.0 [0..28] [469..642]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPTSKDDH DGEGGRDKSS TFVQKLIDVE EAKTQIIYSL PMIFTNLFYY CIPLTSVMFA  60
   61 SQLGQLELAG ATLANSWATV TGFAFMTGLS GALETLCGQG FGAKSYRMLG IHLQSSCIVS 120
  121 LVFTILITIL WFFTESVFLL LRQDPSISKQ AALYMKYLAP GLLAYGFLQN ILRFCQTQCI 180
  181 VTPLVLFSFL PLVINIGTTY ALVHLAGLGF IGAPIATSIS LWIAFVSLGF YVICSDKFKE 240
  241 TWTGFSME

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.69897
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [249-469]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFHHVVLNLT LSIPSAAMVC LEYWAFEILV FLAGLMRNPE ITTSLVAICV NTESISYMLT  60
   61 CGLSAATSTR VSNELGAGNV KGAKKATSVS VKLSLVLALG VVIAILVGHD AWVGLFSNSH 120
  121 VIKEGFASLR FFLAASITLD SIQGVLSGVA RGCGWQRLAT VINLGTFYLI GMPISVLCGF 180
  181 KLKLHAKGLW IGLICGMFCQ SASLLLMTIF RKWTKLTAAT V

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 29.744727
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle