| Protein: | ALIS1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 350 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALIS1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
493.0 | [0..23] | [350..22] |
|
|
470.0 | [0..21] | [350..27] |
|
|
462.0 | [0..2] | [334..3] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MSSSNTPSSS AAAAGSIDSS AARRNSKRPK YSKFTQQELP ACKPILTPGW VISTFLIISV 60
61 IFIPLGVISL FASQDVVEIV DRYDSACIPL SDRANKVAYI QGTGNKSCTR TLIVPKRM
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [119-215] |
1 11 21 31 41 51
| | | | | |
1 KQPIYVYYQL ENFYQNHRRY VKSRSDSQLR SVKDENQIDA CKPEDDFGGQ PIVPCGLIAW 60
61 SLFNDTYVLS RNNQGLTVNK KGIAWKSDKE HKFGKNV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.463 | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.448 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.448 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.417 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.417 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.411 | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.389 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.389 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.373 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.373 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.355 | d.110.6 | Description not found. |
| View | Download | 0.270 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.267 | d.110.6 | Description not found. |
| View | Download | 0.260 | c.30.1 | PreATP-grasp domain |
|
Region A: Residues: [216-350] |
1 11 21 31 41 51
| | | | | |
1 FPKNFQKGNL TGGASLDPNK PLSDQEDLIV WMRTAALPTF RKLYGKIESD LEKGENIQVT 60
61 LQNNYNTYSF SGKKKLVLST TSWLGGKNDF LGIAYLTVGG ICFVLALAFT VMYLVKPRRL 120
121 GDPTYLSWNR IPGGR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.666 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.572 | N/A | N/A | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.572 | N/A | N/A | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.572 | N/A | N/A | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.568 | N/A | N/A | a.138.1 | Multiheme cytochromes |
| View | Download | 0.559 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.559 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.552 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.552 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.533 | N/A | N/A | d.131.1 | DNA clamp |
