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View Structure Prediction Details

Protein: gi|7487980, gi|5...
Organism: Arabidopsis thaliana
Length: 457 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7487980, gi|5....

Description E-value Query
Range
Subject
Range
gi|110736181, gi... - gi|27808612|gb|AAO24586.1| At4g29690 [Arabidopsis thaliana], gi|110736181|dbj|BAF00062.1| nucleotide...
301.0 [0..1] [457..1]

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Predicted Domain #1
Region A:
Residues: [1-457]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKSKPGRSG FSGYILYKLS LTVLIVLSVA VTANGSDSPS SYVRRPQPPK KLNKPVVLLI  60
   61 SCDGFRFGYQ FKTETPNIDL LISRGTEAKT GLIPVFPTMT FPNHYSIATG LYPASHGIIM 120
  121 NKFTDPVSGE LFNRNLNPKW WLGEPLWVTA VNQGLMAATY FWPGADVHKG SWNCPKGFCK 180
  181 APYNVSVPLE ERVDTILNYF DLPEREIPDF MALYFDEPDI QGHEYGPDDP RVTEAVSKVD 240
  241 KMIGRIIMGL EKRKVFSDVH VILLGDHGMV TNCDKKVIYI DDLADWIKIP ADWIQDYSPV 300
  301 LAMNPRWGKD VKNPGQKNAE LVRKMNEALS SGKVANGEFL QVYLKENLPQ RLHYSDSSRI 360
  361 PPIIGMVGEG LMVKQNRTYV QECSGTHGYD NMFFSMRSIF VGYGPRFRRG IKVPSFENVQ 420
  421 VYNAVAEILG LRPAPNNGSS LFTRSLLLPF GETSQVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.221849
Match: 2gsnA
Description: No description for 2gsnA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle