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View Structure Prediction Details

Protein: gi|7486467, gi|1...
Organism: Arabidopsis thaliana
Length: 446 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7486467, gi|1....

Description E-value Query
Range
Subject
Range
gi|37360264 - gi|37360264|dbj|BAC98110.1| mKIAA1153 protein [Mus musculus]
469.0 [0..11] [430..35]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELNKDQTVM SEDKKPQDPN PRFACEGCSV LLDINDGDRL VFARLSSGAI LKIGNKNYSL  60
   61 KPLIGAPFGS LFQVETGEDG SFLSRILPIK QESNSNNVMD DSRDNREIVD NNEAQNLTGE 120
  121 EIEAMRREGA KGDEIIEALI ANSKTFDKKF QLSQEKYKLK KQKKYAPKLL LRRPFARSIC 180
  181 EAYFKKYPAR IGFLRVDALS LLLTMANVTA YSDVLVVDMV GGLVTGAVAE RLGGT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [236-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYVCNTYKGS SPYPVEMVRM FNFSDKVLKR IVQSSINELS SAKTASTEGN NQQEGVCKAE  60
   61 NNINETATSD VMVEEISVTT EAGVVDIVVP ESKII

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [331-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAAKAGAKAS KETIEMWQEN GFSSLIMAAQ DQDPWIVAKD VLPLLSYSAP FAIYHQYLQP  60
   61 LATCMHKLQQ GKMAINLQIT EPWLREYQVL PSRSHPHMQM SSFGGYVLSG IRISTT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.69897
Match: 1i9gA
Description: Probable methyltransferase Rv2118c
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle