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View Structure Prediction Details

Protein: AB8G_ARATH
Organism: Arabidopsis thaliana
Length: 589 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AB8G_ARATH.

Description E-value Query
Range
Subject
Range
gi|66850438, gi|... - gi|70996096|ref|XP_752803.1| ABC transporter [Aspergillus fumigatus Af293], gi|66850438|gb|EAL90765....
gi|159131557 - gi|159131557|gb|EDP56670.1| ABC transporter, putative [Aspergillus fumigatus A1163]
gi|44890030 - gi|44890030|emb|CAF32148.1| ABC transporter, putative [Aspergillus fumigatus]
474.0 [0..2] [588..839]

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Predicted Domain #1
Region A:
Residues: [1-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIPPSPPPE TAAYTLTTSS ISYTIPKTSL SLLRFPATEP PSFILRNITL TAHPTEILAV  60
   61 VGPSGAGKST LLDILASKTS PTSGSILLNS IPINPSSYRK ISSYVPQHDS FFPLLTVSET 120
  121 FSFAACLLLP NPSIVSETVT SLLSELNLTH LSHTRLAQGL SGGERRRVSI GLSLLHDPCF 180
  181 LLLDEPTSGL DSKSAFDVIH ILKSIAVSRQ RTVILSIHQP SFKILSIIDR LLLLSKGTVV 240
  241 YHGRLDSLEG FLLFKGFTVP PQLNSLEYAM EILQELRESD GNTDATALPS IENRKQREKQ 300
  301 SIVRYRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.30103
Match: 2d62A
Description: No description for 2d62A was found.

Predicted Domain #2
Region A:
Residues: [308-589]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRITEISLLA RRFWKIIYRT RQLLLTNALE ALVVGLVLGT IYINIGIGKA GIEKRFGMFA  60
   61 FTLTFLLSST TETLPIFINE RPILLRETSS GIYRLSSHIL ANTLVFLPYL FVISIIYSVS 120
  121 VYFLIGLCPT WQAFGYFVLV IWIILLMANS FVLFLSSLAP NYITGTSLVT ILLAAFFLFS 180
  181 GYFISKESLP KYWLFMYFFS MYKYALDALL INEYSCLASK CLVWLEEAQT KICMVTGGDV 240
  241 LKKKGLHEKQ RWFNVYVLLG FFVLYRVLCF LALLRRVSGS KR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle