| Protein: | AGL62_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 299 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGL62_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
222.0 | [0..6] | [254..1] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MVKKSKGRQK IEMVKMKNES NLQVTFSKRR SGLFKKASEL CTLCGAEVAI VVFSPGRKVF 60
61 SFGHPNVDSV IDRFINNNPL PPHQHNNMQL RETRRNS
|
| Detection Method: |  |
| Confidence: | 23.39794 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.0368771990474 | bayes_pls_golite062009 |
|
Region A: Residues: [98-299] |
1 11 21 31 41 51
| | | | | |
1 IVQDLNNHLT QVLSQLETEK KKYDELKKIR EKTKALGNWW EDPVEELALS QLEGFKGNLE 60
61 NLKKVVTVEA SRFFQANVPN FYVGSSSNNA AFGIDDGSHI NPDMDLFSQR RMMDINAFNY 120
121 NQNQIHPNHA LPPFGNNAYG INEGFVPEYN VNFRPEYNPN QNQIQNQNQV QIQIQNQSFK 180
181 RENISEYEHH HGYPPQSRSD YY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
