YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: U78D2_ARATH
Organism: Arabidopsis thaliana
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for U78D2_ARATH.

Description E-value Query
Range
Subject
Range
gi|113537695, gi... - gi|51964392|ref|XP_506981.1| PREDICTED P0627E03.27 gene product [Oryza sativa (japonica cultivar-gro...
324.0 [0..3] [456..1]

Back

Predicted Domain #1
Region A:
Residues: [1-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKPSDPTRD SHVAVLAFPF GTHAAPLLTV TRRLASASPS TVFSFFNTAQ SNSSLFSSGD  60
   61 EADRPANIRV YDIADGVPEG YVFSGRPQEA IELFLQAAPE NFRREIAKAE TEVGTEVKCL 120
  121 MTDAFFWFAA DMATEINASW IAFWTAGANS LSAHLYTDLI RETIGVKEVG ERMEETIGVI 180
  181 SGMEKIRVKD TPEGVVFGNL DSVFSKMLHQ MGLALPRATA VFINSFEDLD PTLTNNLRSR 240
  241 FKRYLNIGPL GLLSSTLQQL VQDPHGCLAW MEKRSSGSVA YISFGTVMTP PPGELAAIAE 300
  301 GLESSKVPFV WSLKEKSLVQ LPKGFLDRTR EQGIVVPWAP QVELLKHEAT GVFVTHCGWN 360
  361 SVLESVSGGV PMICRPFFGD QRLNGRAVEV VWEIGMTIIN GVFTKDGFEK CLDKVLVQDD 420
  421 GKKMKCNAKK LKELAYEAVS SKGRSSENFR GLLDAVVNII 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.69897
Match: 2c1xA
Description: Title Witheld
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.12142599404571 bayes_pls_golite062009
transferase activity 1.04894606863363 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.929172049566779 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.18186445930239 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle