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View Structure Prediction Details

Protein: GDL15_ARATH
Organism: Arabidopsis thaliana
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL15_ARATH.

Description E-value Query
Range
Subject
Range
gi|21592417 - gi|21592417|gb|AAM64368.1| lipase/hydrolase, putative [Arabidopsis thaliana]
364.0 [0..1] [363..1]

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Predicted Domain #1
Region A:
Residues: [1-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESYLTKWCV VLVLLCFGFS VVKAQAQAQV PCFFVFGDSL VDNGNNNGLI SIARSNYFPY  60
   61 GIDFGGPTGR FSNGKTTVDV IAELLGFNGY IPAYNTVSGR QILSGVNYAS AAAGIREETG 120
  121 RQLGQRISFS GQVRNYQTTV SQVVQLLGDE TRAADYLKRC IYSVGLGSND YLNNYFMPTF 180
  181 YSSSRQFTPE QYANDLISRY STQLNALYNY GARKFALSGI GAVGCSPNAL AGSPDGRTCV 240
  241 DRINSANQIF NNKLRSLVDQ LNNNHPDAKF IYINAYGIFQ DMITNPARFG FRVTNAGCCG 300
  301 IGRNAGQITC LPGQRPCRDR NAYVFWDAFH PTEAANVIIA RRSYNAQSAS DAYPMDISRL 360
  361 AQL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.28
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle