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View Structure Prediction Details

Protein: GOLS1_ARATH
Organism: Arabidopsis thaliana
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GOLS1_ARATH.

Description E-value Query
Range
Subject
Range
gi|4588376 - gi|4588376|gb|AAD26116.1|AF106954_1 galactinol synthase [Brassica napus]
296.0 [0..2] [344..1]

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Predicted Domain #1
Region A:
Residues: [1-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPGLTQTAD AMSTVTITKP SLPSVQDSDR AYVTFLAGNG DYVKGVVGLA KGLRKVKSAY  60
   61 PLVVAMLPDV PEEHRRILVD QGCIVREIEP VYPPENQTQF AMAYYVINYS KLRIWKFVEY 120
  121 SKMIYLDGDI QVYENIDHLF DLPDGYLYAV MDCFCEKTWS HTPQYKIRYC QQCPDKVQWP 180
  181 KAELGEPPAL YFNAGMFLYE PNLETYEDLL RTLKITPPTP FAEQDFLNMY FKKIYKPIPL 240
  241 VYNLVLAMLW RHPENVELGK VKVVHYCAAG SKPWRYTGKE ANMEREDIKM LVKKWWDIYD 300
  301 DESLDYKKPV TVVDTEVDLV NLKPFITALT EAGRLNYVTA PSAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.045757
Match: 1zcvA
Description: apo form of a mutant of glycogenin in which Asp159 is replaced by Asn
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.98626850633439 bayes_pls_golite062009
transferase activity 0.843081158680961 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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