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View Structure Prediction Details

Protein: AB19B_ARATH
Organism: Arabidopsis thaliana
Length: 1252 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for AB19B_ARATH.

Predicted Domain #1
Region A:
Residues: [1-607]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETNTTDAK TVPAEAEKKK EQSLPFFKLF SFADKFDYLL MFVGSLGAIV HGSSMPVFFL  60
   61 LFGQMVNGFG KNQMDLHQMV HEVSRYSLYF VYLGLVVCFS SYAEIACWMY SGERQVAALR 120
  121 KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG 180
  181 FVSAWKLALL SVAVIPGIAF AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY 240
  241 VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD 300
  301 GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ 360
  361 VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG GSGSGKSTVV SLIERFYDPN 420
  421 SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA 480
  481 NAHSFITLLP KGYDTQVGER GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES 540
  541 IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR 600
  601 FQEMVGT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 150.0
Match: 2hydA
Description: No description for 2hydA was found.

Predicted Domain #2
Region A:
Residues: [608-1252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDFSNPSTRR TRSTRLSHSL STKSLSLRSG SLRNLSYSYS TGADGRIEMI SNAETDRKTR  60
   61 APENYFYRLL KLNSPEWPYS IMGAVGSILS GFIGPTFAIV MSNMIEVFYY TDYDSMERKT 120
  121 KEYVFIYIGA GLYAVGAYLI QHYFFSIMGE NLTTRVRRMM LSAILRNEVG WFDEDEHNSS 180
  181 LIAARLATDA ADVKSAIAER ISVILQNMTS LLTSFIVAFI VEWRVSLLIL GTFPLLVLAN 240
  241 FAQQLSLKGF AGDTAKAHAK TSMIAGEGVS NIRTVAAFNA QSKILSLFCH ELRVPQKRSL 300
  301 YRSQTSGFLF GLSQLALYGS EALILWYGAH LVSKGVSTFS KVIKVFVVLV ITANSVAETV 360
  361 SLAPEIIRGG EAVGSVFSVL DRQTRIDPDD ADADPVETIR GDIEFRHVDF AYPSRPDVMV 420
  421 FRDFNLRIRA GHSQALVGAS GSGKSSVIAM IERFYDPLAG KVMIDGKDIR RLNLKSLRLK 480
  481 IGLVQQEPAL FAATIFDNIA YGKDGATESE VIDAARAANA HGFISGLPEG YKTPVGERGV 540
  541 QLSGGQKQRI AIARAVLKNP TVLLLDEATS ALDAESECVL QEALERLMRG RTTVVVAHRL 600
  601 STIRGVDCIG VIQDGRIVEQ GSHSELVSRP EGAYSRLLQL QTHRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 150.0
Match: 3b5xA
Description: No description for 3b5xA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle