| Protein: | REF6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1360 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for REF6_ARATH.
|
Region A: Residues: [1-373] |
1 11 21 31 41 51
| | | | | |
1 MAVSEQSQDV FPWLKSLPVA PEFRPTLAEF QDPIAYILKI EEEASRYGIC KILPPLPPPS 60
61 KKTSISNLNR SLAARAAARV RDGGFGACDY DGGPTFATRQ QQIGFCPRKQ RPVQRPVWQS 120
121 GEEYSFGEFE FKAKNFEKNY LKKCGKKSQL SALEIETLYW RATVDKPFSV EYANDMPGSA 180
181 FIPLSLAAAR RRESGGEGGT VGETAWNMRA MSRAEGSLLK FMKEEIPGVT SPMVYVAMMF 240
241 SWFAWHVEDH DLHSLNYLHM GAGKTWYGVP KDAALAFEEV VRVHGYGEEL NPLVTFSTLG 300
301 EKTTVMSPEV FVKAGIPCCR LVQNPGEFVV TFPGAYHSGF SHGFNFGEAS NIATPEWLRM 360
361 AKDAAIRRAA INY
|
| Detection Method: |  |
| Confidence: | 87.0 |
| Match: | 2oq6A |
| Description: | No description for 2oq6A was found. |
|
Region A: Residues: [374-600] |
1 11 21 31 41 51
| | | | | |
1 PPMVSHLQLL YDFVLALGSR VPTSINPKPR SSRLKDKARS EGERLTKKLF VQNIIHNNEL 60
61 LSSLGKGSPV ALLPQSSSDI SVCSDLRIGS HLITNQENPI QLKCEDLSSD SVVVDLSNGL 120
121 KDTVSVKEKF TSLCERSRNH LASTEKDTQE TLSDAERRKN DAAVALSDQR LFSCVTCGVL 180
181 SFDCVAIVQP KEAAARYLMS ADCSFFNDWT AASGSANLGQ AARSLHP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [601-780] |
1 11 21 31 41 51
| | | | | |
1 QSKEKHDVNY FYNVPVQTMD HSVKTGDQKT STTSPTIAHK DNDVLGMLAS AYGDSSDSEE 60
61 EDQKGLVTPS SKGETKTYDQ EGSDGHEEAR DGRTSDFNCQ RLTSEQNGLS KGGKSSLLEI 120
121 ALPFIPRSDD DSCRLHVFCL EHAAEVEQQL RPFGGINLML LCHPEYPRIE AEAKIVAEEL 180
181
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [781-1020] |
1 11 21 31 41 51
| | | | | |
1 VINHEWNDTE FRNVTREDEE TIQAALDNVE AKGGNSDWTV KLGVNLSYSA ILSRSPLYSK 60
61 QMPYNSIIYK AFGRSSPVAS SPSKPKVSGK RSSRQRKYVV GKWCGKVWMS HQVHPFLLEQ 120
121 DLEGEESERS CHLRVAMDED ATGKRSFPNN VSRDSTTMFG RKYCRKRKIR AKAVPRKKLT 180
181 SFKREDGVSD DTSEDHSYKQ QWRASGNEEE SYFETGNTAS GDSSNQMSDP HKGIIRHKGY 240
241
|
| Detection Method: | |
| Confidence: | 54.09691 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [1021-1135] |
1 11 21 31 41 51
| | | | | |
1 KEFESDDEVS DRSLGEEYTV RACAASESSM ENGSQHSMYD HDDDDDDIDR QPRGIPRSQQ 60
61 TRVFRNPVSY ESEDNGVYQQ SGRISISNRQ ANRMVGEYDS AENSLEERGF CSTGK
|
| Detection Method: | |
| Confidence: | 20.154902 |
| Match: | 2gliA |
| Description: | Five-finger GLI1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1136-1240] |
1 11 21 31 41 51
| | | | | |
1 RQTRSTAKRI AKTKTVQSSR DTKGRFLQEF ASGKKNEELD SYMEGPSTRL RVRHQKPSRG 60
61 SLETKPKKIG KKRSGNASFS RVATEKDVEE KEEEEEEEEN EEEEC
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1241-1360] |
1 11 21 31 41 51
| | | | | |
1 AAYQCNMEGC TMSFSSEKQL MLHKRNICPI KGCGKNFFSH KYLVQHQRVH SDDRPLKCPW 60
61 KGCKMTFKWA WSRTEHIRVH TGARPYVCAE PDCGQTFRFV SDFSRHKRKT GHSVKKTNKR 120
121
|
| Detection Method: | |
| Confidence: | 23.39794 |
| Match: | 1ubdC |
| Description: | Ying-yang 1 (yy1, zinc finger domain) |
Matching Structure (courtesy of the PDB): |
|
