| Protein: | TBR_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 608 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TBR_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
551.0 | [0..1] | [607..1] |
|
Region A: Residues: [1-254] |
1 11 21 31 41 51
| | | | | |
1 MASDAVKYMP IHGGGTTATT AADIKSFFSA LKPKKTSTFA YAFVITFVSF TLFFAFSPSP 60
61 NSSSPWFSNI FTSSSTTTTS DNTSGSQFSS IFSYILPNVT STKPTNRSSD ATDSLSVNAT 120
121 SPPLNSNSKN GTLQTPAPET HTPVAKNTTF ESPIVNGTNP DAKNNTSSHP LLSDKSSTTG 180
181 SNNQSRTTAD TETVNRNQTT SPAPSKAPVS VDLKTNSSSN SSTASSTPKK QTKTVDLVSS 240
241 VKQEIEKWSE SLKN
|
| Detection Method: |  |
| Confidence: | 1.1 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [255-426] |
1 11 21 31 41 51
| | | | | |
1 CEFFDGEWIK DDSYPLYKPG SCNLIDEQFN CITNGRPDKD FQKLKWKPKK CSLPRLNGAI 60
61 LLEMLRGRRL VFVGDSLNRN MWESLVCILK GSVKDETKVY EARGRHHFRG EAEYSFVFQD 120
121 YNCTVEFFVS PFLVQEWEIV DKKGTKKETL RLDLVGKSSE QYKGADVIVF NT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [427-608] |
1 11 21 31 41 51
| | | | | |
1 GHWWTHEKTS KGEDYYQEGS NVYHELAVLE AFRKALTTWG RWVEKNVNPA KSLVFFRGYS 60
61 ASHFSGGQWN SGGACDSETE PIKNDTYLTP YPSKMKVLEK VLRGMKTPVT YLNITRLTDY 120
121 RKDGHPSVYR KQSLSEKEKK SPLLYQDCSH WCLPGVPDSW NEILYAELIV KLNQLSQTQR 180
181 KT
|
| Detection Method: | |
| Confidence: | 70.327902 |
| Match: | PF03005.6 |
| Description: | No description for PF03005.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
