| Protein: | gi|15236291, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 284 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15236291, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
301.0 | [0..2] | [276..148] |
|
Region A: Residues: [1-206] |
1 11 21 31 41 51
| | | | | |
1 MIKVIIENQS GSSFTIDVSF WDTVLMIKRK IEMTQGTPVS KQILIFKRKV LQDHLNMFGC 60
61 QIRHNSRILL SISPDDNPTQ NQVPQTNQSP STPSNPIHEF VNNQDSPLSP KSSALTMEKF 120
121 SKNQQDRPPL MRVVAKRIDN GSSRPSYSLD ELLAPRDSST VAVGSIRNRD QEVKNRVSSP 180
181 SDSVEEVINI TDSLAMKMIV MVQPYG
|
| Detection Method: |  |
| Confidence: | 19.69897 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
|
Region A: Residues: [207-284] |
1 11 21 31 41 51
| | | | | |
1 YTRMIQVEVT ADDNVEELRK ELVKMQERGE LNLPQGMYYL IHKHKQAVLH EDQSFLTNGV 60
61 AYGDTIQISQ GYVKLTSG
|
| Detection Method: | |
| Confidence: | 1.22 |
| Match: | 1yqbA |
| Description: | Human Ubiquilin 3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0155013961187369 | bayes_pls_golite062009 |
