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View Structure Prediction Details

Protein: gi|67633576, gi|...
Organism: Arabidopsis thaliana
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|67633576, gi|....

Description E-value Query
Range
Subject
Range
gi|68373624 - gi|68373624|ref|XP_692242.1| PREDICTED: similar to Cationic amino acid transporter 3 (CAT-3) (Solute...
249.0 [0..1] [386..964]

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Predicted Domain #1
Region A:
Residues: [1-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDLEITHET KKGKSFWAAV SLIIGTAVGP GMLGLPAATI RSGSIPSTIA LLCSWVYVIS  60
   61 SILLVAELSF AAMEEDNAAE VSFTGLATKS FGNKFGVFVA FVYASLSFSL MVACVSGIGS 120
  121 IVSQWFPSMN PFLANAIFPL VSGILIGFFP FNAIDFTNRG LCFLMLFSIT SLVAIGLSVA 180
  181 RSNVLASFGQ SCWKVSMVLP AVPVMVLTLG FHVITPFICN LAGDSVSDAR RAILVGGVVP 240
  241 LAMVLSWNLI VLGLARITVP AAPSSTIDPI SLLLSVNPSA LSAVQGFAFS ALATSLIGYA 300
  301 VSFPKQLLDT WKLVSKQSNG NGRLGSVSFS SKERDRRTNG RASYNEPARA RDGFEAVVML 360
  361 FVLGVPALIA TFFPSTFSRA LDFAGVYANC FLFGVLPPAM AYIQQSRKKL RPWVLPGGNF 420
  421 TLLILFAIAI ILGIWH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.4
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle