| Protein: | gi|18422289, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 463 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18422289, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
495.0 | [0..1] | [463..1] |
|
|
491.0 | [0..1] | [463..1] |
|
|
478.0 | [0..8] | [458..11] |
|
|
475.0 | [0..6] | [461..11] |
|
|
474.0 | [0..8] | [463..1] |
|
|
472.0 | [0..11] | [463..2] |
|
|
461.0 | [0..1] | [463..1] |
|
|
460.0 | [0..1] | [460..1] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MGFLKLSPMI LLLAMIGVSY AMDMSIISYD ENHHITTETS RSDSEVERIY EAWMVEHGKK 60
61 KMNQNGLGAE KDQRFEIFKD NLRFIDEHNT KNLSYKLGLT RFADLTNEEY RSMYLGAKPT 120
121 KRVLKTSDRY QA
|
| Detection Method: |  |
| Confidence: | 3.17 |
| Match: | 1pciA |
| Description: | Caricain (protease omega) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [133-362] |
1 11 21 31 41 51
| | | | | |
1 RVGDALPDSV DWRKEGAVAD VKDQGSCGSC WAFSTIGAVE GINKIVTGDL ISLSEQELVD 60
61 CDTSYNQGCN GGLMDYAFEF IIKNGGIDTE ADYPYKAADG RCDQNRKNAK VVTIDSYEDV 120
121 PENSEASLKK ALAHQPISVA IEAGGRAFQL YSSGVFDGLC GTELDHGVVA VGYGTENGKD 180
181 YWIVRNSWGN RWGESGYIKM ARNIEAPTGK CGIAMEASYP IKKGQNPPNP
|
| Detection Method: | |
| Confidence: | 70.39794 |
| Match: | 1s4vA |
| Description: | The 2.0 A crystal structure of the KDEL-tailed cysteine endopeptidase functioning in programmed cell death of Ricinus communis endosperm |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [363-463] |
1 11 21 31 41 51
| | | | | |
1 GPSPPSPIKP PTTCDKYFSC PESNTCCCLY KYGKYCFGWG CCPLEAATCC DDNSSCCPHE 60
61 YPVCDVNRGT CLMSKNSPFS VKALKRTPAI PFWAKSRKHI A
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.451 | N/A | N/A | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.351 | N/A | N/A | b.82.1 | RmlC-like cupins |
| View | Download | 0.315 | N/A | N/A | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.315 | N/A | N/A | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.291 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.289 | N/A | N/A | a.60.13 | Putative methyltransferase TM0872, insert domain |
| View | Download | 0.244 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.244 | N/A | N/A | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.228 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.204 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
