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View Structure Prediction Details

Protein: VIT1_ARATH
Organism: Arabidopsis thaliana
Length: 250 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VIT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|48780704, gi|... - gi|91778488|ref|YP_553696.1| hypothetical protein Bxe_B1618 [Burkholderia xenovorans LB400], gi|9169...
235.0 [0..26] [249..149]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEEDKITR ISIEPEKQTL LDHHTEKHFT AGEIVRDIII GVSDGLTVPF ALAAGLSGAN  60
   61 ASSSIVLTAG IAEVAAGAIS MGLGGYLAAK SEEDHYAREM KREQEEIVAV PETEAAEVAE 120
  121 ILAQYGIEPH EYSPVVNALR KNPQAWLDFM MRFELGLEKP DPKRALQSAF TIAIAYVLGG 180
  181 FIPLLPYMLI PHAMDAVVAS VVITLFALFI FGYAKGHFTG SKPLRSAFET AFIGAIASAA 240
  241 AFCLAKVVQH 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle