| Protein: | RAVL1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 361 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAVL1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
289.0 | [0..27] | [361..2] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MEYSCVDDSS TTSESLSIST TPKPTTTTEK KLSSPPATSM RLYRMGSGGS SVVLDSENGV 60
61 ETESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEEEAASSYD IAVRRFRGRD 120
121 AVTNFKSQVD GNDAESAFLD AH
|
| Detection Method: |  |
| Confidence: | 13.0 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [143-361] |
1 11 21 31 41 51
| | | | | |
1 SKAEIVDMLR KHTYADEFEQ SRRKFVNGDG KRSGLETATY GNDAVLRARE VLFEKTVTPS 60
61 DVGKLNRLVI PKQHAEKHFP LPAMTTAMGM NPSPTKGVLI NLEDRTGKVW RFRYSYWNSS 120
121 QSYVLTKGWS RFVKEKNLRA GDVVCFERST GPDRQLYIHW KVRSSPVQTV VRLFGVNIFN 180
181 VSNEKPNDVA VECVGKKRSR EDDLFSLGCS KKQAIINIL
|
| Detection Method: | |
| Confidence: | 33.69897 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
