| Protein: | NLP7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 959 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NLP7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
913.0 | [0..1] | [959..1] |
|
|
705.0 | [0..6] | [959..29] |
|
|
699.0 | [0..54] | [959..20] |
|
|
689.0 | [0..6] | [951..29] |
|
|
673.0 | [0..5] | [949..421] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MCEPDDNSAR NGVTTQPSRS RELLMDVDDL DLDGSWPLDQ IPYLSSSNRM ISPIFVSSSS 60
61 EQPCSPLWAF SDGGGNGFHH ATSGGDDEKI SSVSGVPSFR LAEYPLFLPY SSPSAAENTT 120
121 EKHNSFQFPS PLMSL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [136-312] |
1 11 21 31 41 51
| | | | | |
1 VPPENTDNYC VIKERMTQAL RYFKESTEQH VLAQVWAPVR KNGRDLLTTL GQPFVLNPNG 60
61 NGLNQYRMIS LTYMFSVDSE SDVELGLPGR VFRQKLPEWT PNVQYYSSKE FSRLDHALHY 120
121 NVRGTLALPV FNPSGQSCIG VVELIMTSEK IHYAPEVDKV CKALEAVNLK SSEILDH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [313-418] |
1 11 21 31 41 51
| | | | | |
1 QTTQICNESR QNALAEILEV LTVVCETHNL PLAQTWVPCQ HGSVLANGGG LKKNCTSFDG 60
61 SCMGQICMST TDMACYVVDA HVWGFRDACL EHHLQKGQGV AGRAFL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [419-590] |
1 11 21 31 41 51
| | | | | |
1 NGGSCFCRDI TKFCKTQYPL VHYALMFKLT TCFAISLQSS YTGDDSYILE FFLPSSITDD 60
61 QEQDLLLGSI LVTMKEHFQS LRVASGVDFG EDDDKLSFEI IQALPDKKVH SKIESIRVPF 120
121 SGFKSNATET MLIPQPVVQS SDPVNEKINV ATVNGVVKEK KKTEKKRGKT EK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [591-654] |
1 11 21 31 41 51
| | | | | |
1 TISLDVLQQY FTGSLKDAAK SLGVCPTTMK RICRQHGISR WPSRKIKKVN RSITKLKRVI 60
61 ESVQ
|
| Detection Method: | |
| Confidence: | 28.69897 |
| Match: | PF02042.7 |
| Description: | No description for PF02042.7 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [655-856] |
1 11 21 31 41 51
| | | | | |
1 GTDGGLDLTS MAVSSIPWTH GQTSAQPLNS PNGSKPPELP NTNNSPNHWS SDHSPNEPNG 60
61 SPELPPSNGH KRSRTVDESA GTPTSHGSCD GNQLDEPKVP NQDPLFTVGG SPGLLFPPYS 120
121 RDHDVSAASF AMPNRLLGSI DHFRGMLIED AGSSKDLRNL CPTAAFDDKF QDTNWMNNDN 180
181 NSNNNLYAPP KEEAIANVAC EP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [857-959] |
1 11 21 31 41 51
| | | | | |
1 SGSEMRTVTI KASYKDDIIR FRISSGSGIM ELKDEVAKRL KVDAGTFDIK YLDDDNEWVL 60
61 IACDADLQEC LEIPRSSRTK IVRLLVHDVT TNLGSSCEST GEL
|
| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 1vd2A |
| Description: | Solution Structure of the PB1 domain of PKCiota |
Matching Structure (courtesy of the PDB): |
|
