| Protein: | CRF2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 343 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRF2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
290.0 | [0..1] | [343..1] |
|
|
211.0 | [0..5] | [319..221] |
|
|
210.0 | [0..15] | [220..188] |
|
|
208.0 | [0..72] | [334..1] |
|
|
208.0 | [0..1] | [232..182] |
|
|
207.0 | [0..15] | [326..154] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MEAEKKMVLP RIKFTEHKTN TTTIVSELTN THQTRILRIS VTDPDATDSS SDDEEEEHQR 60
61 FVSKRRRVKK FVNEVYLDSG AVVTGSCGQM ESKKRQKRAV KSESTVS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.476 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.476 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.473 | d.371.1 | Description not found. |
| View | Download | 0.378 | b.1.2 | Fibronectin type III |
| View | Download | 0.325 | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.309 | b.1.10 | Clathrin adaptor appendage domain |
| View | Download | 0.309 | b.1.10 | Clathrin adaptor appendage domain |
| View | Download | 0.299 | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.273 | b.1.10 | Clathrin adaptor appendage domain |
| View | Download | 0.268 | b.40.16 | Description not found. |
| View | Download | 0.246 | d.20.1 | UBC-like |
|
Region A: Residues: [108-176] |
1 11 21 31 41 51
| | | | | |
1 PVVSATTTTT GEKKFRGVRQ RPWGKWAAEI RDPLKRVRLW LGTYNTAEEA AMVYDNAAIQ 60
61 LRGPDALTN
|
| Detection Method: | |
| Confidence: | 23.69897 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [177-343] |
1 11 21 31 41 51
| | | | | |
1 FSVTPTTATE KKAPPPSPVK KKKKKNNKSK KSVTASSSIS RSSSNDCLCS PVSVLRSPFA 60
61 VDEFSGISSS PVAAVVVKEE PSMTTVSETF SDFSAPLFSD DDVFDFRSSV VPDYLGGDLF 120
121 GEDLFTADMC TDMNFGFDFG SGLSSWHMED HFQDIGDLFG SDPLLAV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.359 | a.25.1 | Ferritin-like |
| View | Download | 0.262 | a.118.1 | ARM repeat |
| View | Download | 0.262 | a.118.22 | Description not found. |
| View | Download | 0.226 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.207 | d.292.1 | Description not found. |
