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View Structure Prediction Details

Protein: ASD_ARATH
Organism: Arabidopsis thaliana
Length: 514 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASD_ARATH.

Description E-value Query
Range
Subject
Range
gi|37528354, gi|... - gi|37528354|ref|NP_931699.1| ATP-dependent metalloprotease [Photorhabdus luminescens subsp. laumondi...
356.0 [0..37] [511..8]

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Predicted Domain #1
Region A:
Residues: [1-514]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKMGEVWTN TGSALASLVF IYTIFERFFP YRLREHFEPL AQSLIGFIYP YIQITFHEYS  60
   61 GERFKRSDVY DAIQSYLSKD SSSRAKKLTA NTIKGNKSII LSMDDHEEIT DEFQGVKVWW 120
  121 QSKKHQSESR AISFYPKADE SRFYMLKFHR RDREVITKKY LNHVISEGKT IEVKNRERKL 180
  181 YSNNPSQNWS GYKQTKWSHV TFEHPATFDT LAMEYKKKEE IKNDLIKFSN SKDYYKKIGK 240
  241 AWKRGYLLFG PPGTGKSTMI AAMANLLEYD VYDLELTTVK DNTELRRLLI ETSGKSIIVI 300
  301 EDIDCSLDLT GQRKQKKDEE EDEDETSPIE KQMKKDQGEN KGSKVTLSGL LNFIDGLWSA 360
  361 CGGERIIVFT TNFIDKLDPA LIRKGRMDKH IEMSYCGFEA FKVLANNYLD AKEEDDNELF 420
  421 DEIKRLLEVE EIKMTPADVG ENLLKKSEVE TKEICLKRLI EALKEEKEEA KRRIEDEEKK 480
  481 KKEEEEIKRK KREEKKIKKE EKEEKEENET TMKD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.154902
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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