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View Structure Prediction Details

Protein: gi|7573302, gi|1...
Organism: Arabidopsis thaliana
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7573302, gi|1....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
406.0 [0..2] [329..1187]

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Predicted Domain #1
Region A:
Residues: [1-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTELDDGL VRRMAMGAVF SDFGGKIHSV GFHRTDDLLV TSSEDDSLRL FDIANAKQLK  60
   61 ITYHKKHGTD RVCFTHHPSS LICSSRYNLE STGESLRYLS MYDNRILRYF KGHKDRVVSL 120
  121 CMSPINDSFM SGSLDRSVRL WDLRVNACQG ILHLRGRPAV AYDQQGLVFA IAMEGGAVKL 180
  181 FDSRCYDKGP FDTFLVGGDT AEVNDIKFSN DGKSMLLTTT NNNIYVLDAY RGEKKCGFSL 240
  241 EPSQGTPIEA TFTPDGKYVL SGSGDGTLHA WNIENPSEVA RWENNIGVVS CLKWAPRRAM 300
  301 FVAASTVLTF WIPNDGESPA PADPPTDQQQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.0
Match: 2gnqA
Description: No description for 2gnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle