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View Structure Prediction Details

Protein: RL133_ARATH
Organism: Arabidopsis thaliana
Length: 206 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL133_ARATH.

Description E-value Query
Range
Subject
Range
gi|74267768 - gi|74267768|gb|AAI02866.1| RPL13 protein [Bos taurus]
334.0 [0..2] [204..4]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHNNVIPSS HFRKHWQNYV KTWFNQPARK TRRRVARQKK AVKIFPRPTS GPLRPVVHGQ  60
   61 TLKYNMKVRA GKGFTLEELK VAGIPKKLAP TIGISVDHRR KNRSLEGLQS NVQRLKTYKA 120
  121 KLVVFPRRSR QVKAGDSTPE ELANATQVQG DYMPIASVKA AMELVKLTAD LKAFKAYDKI 180
  181 RLERTNARHA GARAKRAAEA EKEEKK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 136.431798
Match: PF01294.9
Description: No description for PF01294.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle