| Protein: | gi|15227436, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 575 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15227436, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
443.0 | [0..9] | [574..4] |
|
|
366.0 | [0..280] | [573..428] |
|
Region A: Residues: [1-65] |
1 11 21 31 41 51
| | | | | |
1 MASGSDSEVE KESIHHKALA ESSFNCGDLM SALTHARKAL SLSPNTEGLS AMVTAFEIIS 60
61 SAATV
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.817 | N/A | N/A | a.7.17 | Description not found. |
| View | Download | 0.693 | N/A | N/A | a.17.1 | p8-MTCP1 |
| View | Download | 0.650 | N/A | N/A | a.7.17 | Description not found. |
| View | Download | 0.617 | N/A | N/A | a.7.17 | Description not found. |
| View | Download | 0.614 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.600 | N/A | N/A | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.590 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.512 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.501 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.485 | N/A | N/A | a.60.1 | SAM/Pointed domain |
|
Region A: Residues: [66-167] |
1 11 21 31 41 51
| | | | | |
1 AGGFPEWYKV LKVEPFSHIN TIKQQYRKLA LVLHPDKNPY VGCEEGFKLL NEAFRVFSDK 60
61 GEMVSGGSGG DETSTFSAVC SGCRSVHKFD RKYLGQNLMC PT
|
| Detection Method: | |
| Confidence: | 22.69897 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [168-357] |
1 11 21 31 41 51
| | | | | |
1 CKNSFEAKEV EKEEEGRENG ACTSKIITYS RRKRPVDSDG ESLIKEVETG EMSQEAAEAI 60
61 NVFEGSDEED EGMMTLAEMQ AVIKRNKSKV NSKITEKDSS GEENMGRETQ KRSLADASMT 120
121 ETLREMSTNA VNNKQEVLKN RKNIKKKKMA NHKDLTEIVD LEYVPRVDRK RDRGKLSQEM 180
181 YMEDEDFELY
|
| Detection Method: | |
| Confidence: | 21.0 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [358-575] |
1 11 21 31 41 51
| | | | | |
1 DFDKDRMPRS FKKGQIWAIY DGGDDKMPRS YCLVSEVVSL NPFKVWISWL DFESEKLISW 60
61 MKISSSHMPC GRFRVSEKAL IEQVKPFSHL VNCERAAREI YQIYPKKGSV WAVYSETNPG 120
121 LQRRKTRRYE IVVCLTMYTD AYGLSVAYLE KVNDYSNLFK RRDYGYNAVR WVEKEDVAAL 180
181 LSHQIPAKKL PEDESGADLK ESWVLDLASV PPDLVSAT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
