| Protein: | CAAT8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 590 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAAT8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
406.0 | [0..6] | [577..900] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MIPASMEEAH QLESRSDDLS QRRSYWRWRK QDFFPEFSFQ SFSTYKSALS ATCPRLADRL 60
61 LSRSSDAYEL DAARRE
|
| Detection Method: |  |
| Confidence: | 1.02 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [77-505] |
1 11 21 31 41 51
| | | | | |
1 SENPMRRCLT WWDLLWLSFG SVVGSGVFVI TGQEARVGAG PAVVLSYAIS GVSALLSVLC 60
61 YAEFGVEIPV AGGSFSYLRV ELGDFIAFIA AGNILLEAMV GAAGLGRSWS SYLASLVKND 120
121 SDYFRIKVDS FAKGFDLLDP VAVAVLLVAN GIAMTGTKRT SWLNLITSMV TVCIIVFIVV 180
181 VGFTHSKTSN LVPFFPYGAK GVVQSAAVVY WSYTGFDMVA NMAEETEKPS RDIPIGLVGS 240
241 MSMITVVYCL MALALTMMVK YTEIDANAAY SVAFAQIGMK WAKYLVGICA LKGMTTSLLV 300
301 GSLGQARYTT QIARSHMIPP WFALVHPKTG TPIYATLLVT ILSSIISFFT SLEVLSSVFS 360
361 FATLFIFMLV AVALLVRRYY VKDVTPEAGL LKFLGFLFLI IASSIGVSAL WNSGVKGWIA 420
421 YTVTGVIWF
|
| Detection Method: | |
| Confidence: | 1.28 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [506-590] |
1 11 21 31 41 51
| | | | | |
1 IGTLGLALLP KYRVPKVWGV PLVPWLPSFS IAMNLFLIGS LGYVAFLRFI ICTMVMLLYY 60
61 LFVGLHATYD VAHQPLEEAK FEGER
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
