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View Structure Prediction Details

Protein: gi|3096945, gi|7...
Organism: Arabidopsis thaliana
Length: 107 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3096945, gi|7....

Description E-value Query
Range
Subject
Range
gi|23198300, gi|... - gi|23198300|gb|AAN15677.1| Putative auxin-regulated protein [Arabidopsis thaliana], gi|17745689|gb|A...
180.0 [0..1] [107..1]
gi|217075552, gi... - gi|92870685|gb|ABE79956.1| Auxin responsive SAUR protein [Medicago truncatula], gi|217075552|gb|ACJ8...
156.0 [0..1] [107..1]
gi|20149050 - gi|20149050|gb|AAM12780.1| auxin-induced SAUR-like protein [Capsicum annuum]
154.0 [0..1] [107..1]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIMKKTSKL TQTAMLKQIL KRCSSLGKKN GGGYDEDCLP LDVPKGHFPV YVGENRSRYI  60
   61 VPISFLTHPE FQSLLQRAEE EFGFDHDMGL TIPCDELVFQ TLTSMIR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 56.958607
Match: PF02519.5
Description: No description for PF02519.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.533 N/A N/A d.108.1 Acyl-CoA N-acyltransferases (Nat)
View Download 0.474 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.466 N/A N/A d.79.3 L30e-like
View Download 0.441 N/A N/A d.108.1 Acyl-CoA N-acyltransferases (Nat)
View Download 0.435 N/A N/A d.108.1 Acyl-CoA N-acyltransferases (Nat)
View Download 0.389 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.375 N/A N/A a.23.4 Mitochondrial import receptor subunit Tom20
View Download 0.355 N/A N/A d.326.1 Description not found.
View Download 0.326 N/A N/A f.14.1 Voltage-gated potassium channels
View Download 0.315 N/A N/A a.142.1 PTS-regulatory domain, PRD
View Download 0.306 N/A N/A d.52.4 YhbC-like, N-terminal domain
View Download 0.278 N/A N/A d.58.4 Dimeric alpha+beta barrel
View Download 0.240 N/A N/A d.52.5 Probable GTPase Der, C-terminal domain
View Download 0.233 N/A N/A c.52.2 tRNA splicing endonuclease, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle