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View Structure Prediction Details

Protein: CIPKF_ARATH
Organism: Arabidopsis thaliana
Length: 421 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CIPKF_ARATH.

Description E-value Query
Range
Subject
Range
gi|125524847 - gi|125524847|gb|EAY72961.1| hypothetical protein OsI_00833 [Oryza sativa Indica Group]
CIPK5_ORYSJ - CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1
381.0 [0..1] [418..1]

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Predicted Domain #1
Region A:
Residues: [1-336]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKGSVLML RYEVGKFLGQ GTFAKVYHAR HLKTGDSVAI KVIDKERILK VGMTEQIKRE  60
   61 ISAMRLLRHP NIVELHEVMA TKSKIYFVME HVKGGELFNK VSTGKLREDV ARKYFQQLVR 120
  121 AVDFCHSRGV CHRDLKPENL LLDEHGNLKI SDFGLSALSD SRRQDGLLHT TCGTPAYVAP 180
  181 EVISRNGYDG FKADVWSCGV ILFVLLAGYL PFRDSNLMEL YKKIGKAEVK FPNWLAPGAK 240
  241 RLLKRILDPN PNTRVSTEKI MKSSWFRKGL QEEVKESVEE ETEVDAEAEG NASAEKEKKR 300
  301 CINLNAFEII SLSTGFDLSG LFEKGEEKEE MRFTSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.522879
Match: 1zmuA
Description: Catalytic and ubiqutin-associated domains of MARK2/PAR-1: Wild type
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [337-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REASEITEKL VEIGKDLKMK VRKKEHEWRV KMSAEATVVE AEVFEIAPSY HMVVLKKSGG  60
   61 DTAEYKRVMK ESIRPALIDF VLAWH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 2ehbD
Description: No description for 2ehbD was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle