| Protein: | PME43_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 701 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME43_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
527.0 | [0..168] | [699..45] |
|
Region A: Residues: [1-199] |
1 11 21 31 41 51
| | | | | |
1 MNKYVLLGVT ALIMAMVICV EANDGNSPSR KMEEVHRESK LMITKTTVSI ICASTDYKQD 60
61 CTTSLATVRS PDPRNLIRSA FDLAIISIRS GIDRGMIDLK SRADADMHTR EALNTCRELM 120
121 DDAIDDLRKT RDKFRGFLFT RLSDFVEDLC VWLSGSITYQ QTCIDGFEGI DSEAAVMMER 180
181 VMRKGQHLTS NGLAIAANL
|
| Detection Method: |  |
| Confidence: | 21.69897 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [200-377] |
1 11 21 31 41 51
| | | | | |
1 DKLLKAFRIP FPFLRSRRGR LGILGSGSSR DESVGSSQDS PPNEDSSDDS PSTVDSSENQ 60
61 PVDSSSENQS SDSSNNRPLD SSKNQQMESS EDTPKKSAFS GNQPLDDSSD KLPQKSTSSE 120
121 NQPLDSSENP PQKSTSSENR PLDPLRKLNP LNKLDSLKDR HLSEEGEFPP WVTPHSRR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [378-701] |
1 11 21 31 41 51
| | | | | |
1 LLARRPRNNG IKANVVVAKD GSGKCKTIAQ ALAMVPMKNT KKFVIHIKEG VYKEKVEVTK 60
61 KMLHVMFVGD GPTKTVITGD IAFLPDQVGT YRTASVAVNG DYFMAKDIGF ENTAGAARHQ 120
121 AVALRVSADF AVFFNCHMNG YQDTLYVHTH RQFYRNCRVS GTIDFVFGDA KAVFQNCEFV 180
181 IRRPMEHQQC IVTAQGRKDR RETTGIVIHN SRITGDASYL PVKAKNRAFL GRPWKEFSRT 240
241 IIMNTEIDDV IDPEGWLKWN ETFALNTLFY TEYRNRGRGS GQGRRVRWRG IKRISDRAAR 300
301 EFAPGNFLRG NTWIPQTRIP YNAN
|
| Detection Method: | |
| Confidence: | 110.0 |
| Match: | 1xg2A |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
| Matching Structure (courtesy of the PDB): |
|
