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View Structure Prediction Details

Protein: gi|15240694, gi|...
Organism: Arabidopsis thaliana
Length: 450 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240694, gi|....

Description E-value Query
Range
Subject
Range
gi|21553850 - gi|21553850|gb|AAM62943.1| hypersensitivity-related protein-like protein [Arabidopsis thaliana]
307.0 [0..1] [450..1]

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Predicted Domain #1
Region A:
Residues: [1-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSQGMSSPS PLVVKKSQVV IVKPSKATPD VSLSLSTLDN DPYLETLAKT IYVYAPPSPN  60
   61 DHVHDPASLF QQALSDALVY YYPLAGKLHR GSHDHRLELR CSPAEGVPFV RATADCTLSS 120
  121 LNYLKDMDTD LYQLVPCDVA APSGDYNPLA LQITLFACGG LTLATALSHS LCDGFGASQF 180
  181 FKTLTELAAG KTQPSIIPVW DRHRLTSNNF SLNDQVEEGQ APKLVDFGEA CSSAATSPYT 240
  241 PSNDMVCEIL NVTSEDITQL KEKVAGVVTT LEILAAHVWR ARCRALKLSP DGTSLFGMAV 300
  301 GIRRIVEPPL PEGYYGNAFV KANVAMKAGE LSNSPLSHVV QLIKEAKKAA QEKRYVLEQL 360
  361 RETEKTLKMN VACEGGKGAF MLLTDWRQLG LLDEIDFGYG GSVNIIPLVP KYLPDICIFL 420
  421 PRKQGGVRVL VTLPKSVMVN FKEHINPLNT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.221849
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle