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View Structure Prediction Details

Protein: gi|21595327, gi|...
Organism: Arabidopsis thaliana
Length: 106 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21595327, gi|....

Description E-value Query
Range
Subject
Range
gi|34013886 - gb|AAQ56111.1| pollen specific glycine-rich protein GRP17 [Boechera drummondii]
gi|34013886 - gi|34013886|gb|AAQ56111.1| pollen specific glycine-rich protein GRP17 [Boechera drummondii]
137.0 [0..1] [105..58]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEIIQAVFS AGVALALLTF AGITLGGSVV ACIISTPLFV IFSPVLVPAT IATTLLASGF  60
   61 TASGSFGATA FTILSWLYKK RTGRDLPKIP GLTPPAPASN PAGSGV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 24.0
Match: PF01277.8
Description: No description for PF01277.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle