| Protein: | LHTL8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 519 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LHTL8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
244.0 | [0..78] | [474..959] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MDERPETELI SIPATPRVST PEILTPSGQR SPRPATKPSS ATWTPTSFIS PRFLSPIGTP 60
61 MKRVLVNMKG YLEEVGHLTK LNPQDAWL
|
| Detection Method: |  |
| Confidence: | 1.32 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [89-519] |
1 11 21 31 41 51
| | | | | |
1 PITESRNGNA HYAAFHNLNA GVGFQALVLP VAFAFLGWSW GILSLTIAYC WQLYTLWILV 60
61 QLHEAVPGKR YNRYVELAQA AFGERLGVWL ALFPTVYLSA GTATALILIG GETMKLFFQI 120
121 VCGPLCTSNP LTTVEWYLVF TSLCIVLSQL PNLNSIAGLS LIGAVTAITY STMVWVLSVS 180
181 QPRPATISYE PLSMPSTSGS LFAVLNALGI IAFAFRGHNL VLEIQSTMPS TFKHPAHVPM 240
241 WRGAKISYFL IALCIFPISI GGFWAYGNLM PSGGMLAALY AFHIHDIPRG LLATAFLLVV 300
301 FSCLSSFQIY SMPAFDSFEA GYTSRTNKPC SIWVRSGFRV FFGFVSFFIG VALPFLSSLA 360
361 GLLGGLTLPV TFAYPCFMWV LIKKPAKYSF NWYFHWGLGW LGVAFSLAFS IGGIWSMVTN 420
421 GLKLKFFKPP N
|
| Detection Method: | |
| Confidence: | 1.53 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
