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View Structure Prediction Details

Protein: gi|42561620, gi|...
Organism: Arabidopsis thaliana
Length: 502 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42561620, gi|....

Description E-value Query
Range
Subject
Range
gi|157117432, gi... - gi|157117432|ref|XP_001658764.1| tyrosine transporter [Aedes aegypti], gi|108876049|gb|EAT40274.1| t...
240.0 [0..3] [501..317]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMAPVIKLV LGSVAFAIFW ILAVFPSVPF LPIGRTAGSL FGAMLMVIFQ VITPEQAYAA  60
   61 IDLPILGLLF GTMVVSIYLE RADMFKYLGT LLSWKSRGPK DLLCRVCLVS AVSSALFTND 120
  121 TSCVVLTEFV LKIARQKNLP PHPFLLALAT SANIGSSATP IGNPQNLVIA VQSKIPFWEF 180
  181 LLGVFPAMIV GITVNAMLLL GMYWRL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [207-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSDHKEDEEE VQNADSEVVA QEDVQSHRFS PATFSPVSSE DSNLRMDAAE TLRNRAGSAG  60
   61 ESELISCNSN ASREQHNDAE SQGESNNTNN MFQTKRWRRV LWKSSVYF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [315-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITLGMLISLL MGLNMSWTAI TAALALVVLD FKDARPSLEK VSYSLLIFFC GMFITVDGFN  60
   61 KTGIPTALWD LMEPYAKIDQ AKGIAVLAVV ILVLSNVASN VPTVLLLGAR VAASAMGREE 120
  121 EKKAWLLLAW VSTVAGNLTL LGSAANLIVC EQARRAVSHG YTLTFTKHFK FGLPSTLIVT 180
  181 AIGLFLIK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle