Protein: | LSG12_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 589 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LSG12_ARATH.
Description | E-value | Query Range |
Subject Range |
|
270.0 | [0..1] | [481..1] |
|
265.0 | [0..3] | [524..50] |
|
262.0 | [0..84] | [465..2] |
|
261.0 | [0..4] | [587..7] |
|
260.0 | [0..84] | [465..2] |
|
259.0 | [0..84] | [465..2] |
|
258.0 | [0..86] | [465..16] |
|
258.0 | [0..86] | [465..16] |
|
258.0 | [0..86] | [465..3] |
|
258.0 | [0..86] | [465..3] |
Region A: Residues: [1-84] |
1 11 21 31 41 51 | | | | | | 1 MGKSEKTSLG RSLVKHHNHM IQESKDKGKY YKNLQKKVLE SVTEVSDIDA IIEQAEEAER 60 61 LYTINHSSST PLSINLDTNS SSSV |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [85-475] |
1 11 21 31 41 51 | | | | | | 1 IAAEEWREQQ KIEEALHASS LQVPRRPPWT PEMSVEELDA NEKQAFLNWR RMLVSLEENE 60 61 KLVLTPFEKN LDIWRQLWRV LERSDLIVMV VDARDPLFYR CPDLEAYAQE IDEHKKIMLL 120 121 VNKADLLPTD VREKWAEYFR LNNILFVFWS AIAATATLEG KVLKEQWRQP DNLQKTDDPD 180 181 IMIYGRDELL SRLQFEAQEI VKVRNSRAAS VSSQSWTGEY QRDQAVVGFV GYPNVGKSST 240 241 INALVGQKRT GVTSTPGKTK HFQTLIISDE LMLCDCPGLV FPSFSSSRYE MIASGVLPID 300 301 RMTEHREAIQ VVADKVPRRV IESVYNISLP KPKTYERQSR PPHAAELLKS YCASRGYVAS 360 361 SGLPDETKAA RLILKDYIGG KLPHYAMPPG M |
Detection Method: | ![]() |
Confidence: | 63.69897 |
Match: | 2hjgA |
Description: | No description for 2hjgA was found. |
Region A: Residues: [476-589] |
1 11 21 31 41 51 | | | | | | 1 PQADEPDIED TQELEDILEG SESDDSAVGD ETENEQVPGI DDVLDDLSSF DLANGLKSSK 60 61 KVTAKKQTAS HKQHKKPQRK KDRTWRVQNT EDGDGMPSVK VFQKPANTGP LTMR |
Detection Method: | ![]() |
Confidence: | 57.221849 |
Match: | 1egaA |
Description: | GTPase Era, N-terminal domain; GTPase Era C-terminal domain |
Matching Structure (courtesy of the PDB):![]() |