| Protein: | HS26M_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 232 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HS26M_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
168.0 | [0..1] | [231..1] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MALARLALRN LQQKLSPSLM GQSCERGLVG NRHNPMKLNR FMATSAGEQE DKMNTEVSVS 60
61 EKKSPRQNFP RR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.273 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.246 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.245 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.227 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.223 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
|
Region A: Residues: [73-232] |
1 11 21 31 41 51
| | | | | |
1 RGRKSLWRNT DDHGYFTPTL NEFFPPTIGN TLIQATENMN RIFDNFNVNP FQLMGQVKEQ 60
61 DDCYKLRYEV PGLTKEDVKI TVNDGILTIK GDHKAEEEKG SPEEDEYWSS KSYGYYNTSL 120
121 SLPDDAKVED IKAELKNGVL NLVIPRTEKP KKNVQEISVE
|
| Detection Method: | |
| Confidence: | 27.0 |
| Match: | 1gmeA |
| Description: | Small heat shock protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.54721252992048 | bayes_pls_golite062009 |
| protein binding | 0.643437066451821 | bayes_pls_golite062009 |
| catalytic activity | 0.260308151913118 | bayes_pls_golite062009 |
