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View Structure Prediction Details

Protein: IPT8_ARATH
Organism: Arabidopsis thaliana
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPT8_ARATH.

Description E-value Query
Range
Subject
Range
gi|67157128|ref|... - tRNA isopentenyltransferase [Azotobacter vinelandii AvOP]
gi|67157128, gi|... - gi|67157128|ref|ZP_00418490.1| tRNA isopentenyltransferase [Azotobacter vinelandii AvOP], gi|6708580...
270.0 [0..5] [296..13]

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Predicted Domain #1
Region A:
Residues: [1-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNLTSTFVS PSMIPITSPR LRLPPPRSVV PMTTVCMEQS YKQKVVVIMG ATGSGKSCLS  60
   61 IDLATRFSGE IVNSDKIQFY DGLKVTTNQM SILERCGVPH HLLGELPPDD SELTTSEFRS 120
  121 LASRSISEIT ARGNLPIIAG GSNSFIHALL VDRFDPKTYP FSSETSISSG LRYECCFLWV 180
  181 DVSVSVLFEY LSKRVDQMME SGMFEELAGF YDPRYSGSAI RAHGIHKTIG IPEFDRYFSL 240
  241 YPPERKQKMS EWDQARKGAY DEAVQEIKEN TWRLAKKQIE RIMKLKSSGW DIQRLDATPS 300
  301 FGRSSREIWD NTVLDESIKV VKRFLVKDKV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.045757
Match: 2qgnA
Description: No description for 2qgnA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle