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View Structure Prediction Details

Protein: IQM2_ARATH
Organism: Arabidopsis thaliana
Length: 605 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IQM2_ARATH.

Description E-value Query
Range
Subject
Range
gi|92869803 - gi|92869803|gb|ABE79293.1| IQ calmodulin-binding region [Medicago truncatula]
596.0 [0..1] [575..1]
gi|222612815, gi... - gi|78708621|gb|ABB47596.1| calmodulin-binding family protein, putative, expressed [Oryza sativa (jap...
585.0 [0..1] [598..1]
IQM6_ARATH - IQ domain-containing protein IQM6 OS=Arabidopsis thaliana GN=IQM6 PE=2 SV=1
519.0 [0..33] [595..1]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG  60
   61 KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-229]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSVLDPRNPK HEAAIKLQKV YKSFRTRRKL ADCAVLVEQS WWKLLDFAEL KRSSISFFDI  60
   61 EKHETAISRW SRARTRAAKV GKGLSKNGKA QKLALQHWLE AIDPRHRYGH NLHFYYNKWL 120
  121 HCQSREPFFY WLDI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #3
Region A:
Residues: [230-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEGKEVNLVE KCPRLKLQQQ CIKYLGPMER KAYEVVVEDG KFFYKHSGEI LQTSDMEDSE  60
   61 SKWIFVLSTS KVLYVGKKKK GTFQHSSFLA GGATVAAGRL VVENGVLKAV WPHSGHYQPT 120
  121 EENFMDFLSF LRENDVDITD VKMSPTDEDE FSIYKQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [386-605]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSTHMRNHSL EEDLEAEKTI SFQDKVDPSG EEQTLMRNES ISRKQSDLET PEKMESFSTF  60
   61 GDEIQSVGSK STKVSEDYDS GDDEEEEEEM FELEQESMPS EQSSPRGEEK EEGETKESEV 120
  121 VKITEESILK RINSKKETKS FQLGKQLSCK WTTGAGPRIG CVRDYPSELQ FQALEQVNLS 180
  181 PRSASVSRLC FSSSSQTQTP QMSPLWRGMS LPTDITLTNS 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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