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View Structure Prediction Details

Protein: gi|15242288, gi|...
Organism: Arabidopsis thaliana
Length: 96 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242288, gi|....

Description E-value Query
Range
Subject
Range
gi|29569832 - gi|29569832|gb|AAO85389.1| tapetum-specific protein BcA9 [Brassica rapa]
gi|29569832|gb|A... - tapetum-specific protein BcA9 [Brassica rapa]
100.0 [0..8] [95..5]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASSKYSSM SFMKVAMMVA LVLVVAATVV DGQSCNAQLS TLNVCGEFVV PGADRTNPSA  60
   61 ECCNALEAVP NECLCNTFRI ASRLPSRCNI PTLSCS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.16
Match: 1afhA
Description: LIPID TRANSFER PROTEIN FROM MAIZE SEEDLINGS, NMR, 15 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle