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View Structure Prediction Details

Protein: FNRL1_ARATH
Organism: Arabidopsis thaliana
Length: 360 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FNRL1_ARATH.

Description E-value Query
Range
Subject
Range
FENR1_PEA - Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Pisum sativum GN=PETH PE=1 SV=1
gi|226545 - gi|226545|prf||1601517A ferredoxin NADP reductase
289.0 [0..1] [360..1]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAISAAVS LPSSKSSSLL TKISSVSPQR IFLKKSTVCY RRVVSVKAQV TTDTTEAPPV  60
   61 KVVKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.0
Match: 1a70A
Description: SPINACH FERREDOXIN
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [66-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKKQEEGIVV NKFKPKNPYT GRCLLNTKIT GDDAPGETWH IVFTTEGEVP YREGQSIGVI  60
   61 PEGIDKNGKP HKLRLYSIAS SAIGDFGDSK TVSLCVKRLV YTNDGGEIVK GVCSNFLCDL 120
  121 KPGDEAKITG PVGKEMLMPK DPNATIIMLG TGTGIAPFRS FLWKMFFEEH EDYKFNGLAW 180
  181 LFLGVPTSSS LLYKEEFEKM KEKNPDNFRL DFAVSREQTN EKGEKMYIQT RMAEYAEELW 240
  241 ELLKKDNTFV YMCGLKGMEK GIDDIMVSLA AKDGIDWLEY KKQLKRSEQW NVEVY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.30103
Match: 1gaqA
Description: Ferredoxin reductase (flavodoxin reductase) N-terminal domain; Ferredoxin reductase (flavodoxin reductase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.923682288946602 bayes_pls_golite062009
oxidoreductase activity 0.6192827046908 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle