| Protein: | PME40_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 518 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME40_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
536.0 | [0..1] | [518..54] |
|
Region A: Residues: [1-191] |
1 11 21 31 41 51
| | | | | |
1 MTTKSKHIIL SLTFLLLFLS TVFSSHVTQR FTSSDDITEL VVTALNQTIS NVNLSSSNFS 60
61 DLLQRLGSNL SHRDLCAFDD CLELLDDTVF DLTTAISKLR SHSPELHNVK MLLSAAMTNT 120
121 RTCLDGFASS DNDENLNNND NKTYGVAESL KESLFNISSH VSDSLAMLEN IPGHIPGKVK 180
181 EDVGFPMWVS G
|
| Detection Method: |  |
| Confidence: | 22.69897 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [192-518] |
1 11 21 31 41 51
| | | | | |
1 SDRNLLQDPV DETKVNLVVA QNGTGNYTTI GEAISAAPNS SETRFVIYIK CGEYFENIEI 60
61 PREKTMIMFI GDGIGRTVIK ANRSYADGWT AFHSATVGVR GSGFIAKDLS FVNYAGPEKH 120
121 QAVALRSSSD LSAYYRCSFE SYQDTIYVHS HKQFYRECDI YGTVDFIFGD ASVVFQNCSL 180
181 YARRPNPNQK IIYTAQGREN SREPTGISII SSRILAAPDL IPVQANFKAY LGRPWQLYSR 240
241 TVIMKSFIDD LVDPAGWLKW KDDFALETLY YGEYMNEGPG SNMTNRVQWP GFKRIETVEE 300
301 ASQFSVGPFI DGNKWLNSTR IPFTLDL
|
| Detection Method: | |
| Confidence: | 102.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
