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View Structure Prediction Details

Protein: RS31_ARATH
Organism: Arabidopsis thaliana
Length: 250 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RS31_ARATH.

Description E-value Query
Range
Subject
Range
RS3_PONAB - 40S ribosomal protein S3 OS=Pongo abelii GN=RPS3 PE=2 SV=1
gi|62897657 - gi|62897657|dbj|BAD96768.1| ribosomal protein S3 variant [Homo sapiens]
RS3_PONPY - 40S ribosomal protein S3 - Pongo pygmaeus (Orangutan)
269.0 [0..1] [249..1]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQISKKRK FVADGVFYAE LNEVLTRELA EDGYSGVEVR VTPMRTEIII RATRTQNVLG  60
   61 EKGRRIRELT SLVQKRFKFP VDSVELYAEK VNNRGLCAIA QAESLRYKLL GGLAVRRACY 120
  121 GVLRFVMESG AKGCEVIVSG KLRAARAKSM KFKDGYMVSS GQPTKEYIDA AVRHVLLRQG 180
  181 VLGIKVKIML DWDPTGKSGP KTPLPDVVII HAPKDDVVYS APAQAAAPVT LVQEAPLTTV 240
  241 DYPEMIPPVA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.30103
Match: 1s1hC
Description: Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.
Matching Structure (courtesy of the PDB):

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