YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: 3HID2_ARATH
Organism: Arabidopsis thaliana
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 3HID2_ARATH.

Description E-value Query
Range
Subject
Range
gi|56419562, gi|... - gi|56419562|ref|YP_146880.1| 3-hydroxyisobutyrate dehydrogenase [Geobacillus kaustophilus HTA426], g...
202.0 [0..14] [292..2]

Back

Predicted Domain #1
Region A:
Residues: [1-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METQYPKLIE PSKTRIGWIG IGIMGSAMVS HILAAGYSVT VYARDLRKTK DLQTKGGRTA  60
   61 NSPKELGEMS DVVFTIVGNS NDVRSLLLGD DGVLSGLKPG GVTVDMTSSK PGLAREIYAE 120
  121 ARRRDCWAVD APVSGGDAGA REGKLTIFAG GDSEIVEWLA PVMKTMGIVR FMGGAGSGQS 180
  181 CKIGNQICVG SNMIGLAEGI VFAEKAGLDP VKWLEAVKDG AAGSAVMRLF GEMMAVRDYK 240
  241 ATGFAEYMVK DLGMAAEAAM AMPGTALNKQ LFTVMVANGD GKLGFQGVVD VIRRLNGLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.69897
Match: 1yb4A
Description: Crystal Structure of the Tartronic Semialdehyde Reductase from Salmonella typhimurium LT2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle