YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: KCS16_ARATH
Organism: Arabidopsis thaliana
Length: 493 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCS16_ARATH.

Description E-value Query
Range
Subject
Range
KCS4_ARATH - 3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1
463.0 [0..2] [487..35]

Back

Predicted Domain #1
Region A:
Residues: [1-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYPMKKVKI FFNYLMAHRF KLCFLPLMVA IAVEASRLST QDLQNFYLYL QNNHTSLTMF  60
   61 FLYLALGSTL YLMTRPKPVY LVDFSCYLPP SHLKASTQRI MQHVRLVREA GAWKQESDYL 120
  121 MDFCEKILER SGLGQETYVP EGLQTLPLQQ NLAVSRIETE EVIIGAVDNL FRNTGISPSD 180
  181 IGILVVNSST FNPTPSLSSI LVNKFKLRDN IKSLNLGGMG CSAGVIAIDA AKSLLQVHRN 240
  241 TYALVVSTEN ITQNLYMGNN KSMLVTNCLF RIGGAAILLS NRSIDRKRAK YELVHTVRVH 300
  301 TGADDRSYEC ATQEEDEDGI VGVSLSKNLP MVAARTLKIN IATLGPLVLP ISEKFHFFVR 360
  361 FVKKKFLNPK LKHYIPDFKL AFEHFCIHAG GRALIDEMEK NLHLTPLDVE ASRMTLHRFG 420
  421 NTSSSSIWYE LAYTEAKGRM TKGDRIWQIA LGSGFKCNSS VWVALRNVKP STNNPWEQCL 480
  481 HKYPVEIDID LKE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.30103
Match: 1ee0A
Description: Pyrone synthase (PyS, chalcone synthase 2)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.61499311836466 bayes_pls_golite062009
transferase activity 1.02674433736465 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.95018443969363 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 0.71137845857094 bayes_pls_golite062009
acyltransferase activity 0.57223728364314 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle