| Protein: | PEX5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 728 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
386.0 | [0..2] | [728..195] |
|
|
378.0 | [0..2] | [728..316] |
|
|
368.0 | [0..1] | [728..1] |
|
|
366.0 | [0..135] | [726..14] |
|
|
366.0 | [0..38] | [727..346] |
|
|
354.0 | [0..1] | [728..1] |
|
|
328.0 | [0..7] | [728..247] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MAMRDLVNGG AACAVPGSSS SSNPLGALTN ALLGSSSKTQ ERLKEIPNAN RSGPRPQFYS 60
61 EDQQIRSLPG SELDQPLLQP GAQGSEFFRG FRSVDQNGLG AAWDEVQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.325 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.325 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.253 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.205 | a.24.4 | Hemerythrin |
| View | Download | 0.204 | a.71.2 | Helical domain of Sec23/24 |
|
Region A: Residues: [108-587] |
1 11 21 31 41 51
| | | | | |
1 QGGPMPPMGP MFEPVQPTFE GPPQRVLSNF LHSFVESSRG GIPFRPAPVP VLGLSQSDKQ 60
61 CIRDRSSIMA RHFFADRGEE FINSQVNALL SSLDIDDGIQ ARGHVPGRFR ELDDYWNESQ 120
121 AVVKPNLHPA DNWAAEFNQH GMDHGGPDSW VQSFEQQHGV NGWATEFEQG QSQLMSSQMR 180
181 SMDMQNIAAM EQTRKLAHTL SQDGNPKFQN SRFLQFVSKM SRGELIIDEN QVKQASAPGE 240
241 WATEYEQQYL GPPSWADQFA NEKLSHGPEQ WADEFASGRG QQETAEDQWV NEFSKLNVDD 300
301 WIDEFAEGPV GDSSADAWAN AYDEFLNEKN AGKQTSGVYV FSDMNPYVGH PEPMKEGQEL 360
361 FRKGLLSEAA LALEAEVMKN PENAEGWRLL GVTHAENDDD QQAIAAMMRA QEADPTNLEV 420
421 LLALGVSHTN ELEQATALKY LYGWLRNHPK YGAIAPPELA DSLYHADIAR LFNEASQLNP 480
481
|
| Detection Method: | |
| Confidence: | 4.221849 |
| Match: | 2ooeA |
| Description: | No description for 2ooeA was found. |
|
Region A: Residues: [588-637] |
1 11 21 31 41 51
| | | | | |
1 EDADVHIVLG VLYNLSREFD RAITSFQTAL QLKPNDYSLW NKLGATQANS
|
| Detection Method: | |
| Confidence: | 51.69897 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [638-728] |
1 11 21 31 41 51
| | | | | |
1 VQSADAISAY QQALDLKPNY VRAWANMGIS YANQGMYKES IPYYVRALAM NPKADNAWQY 60
61 LRLSLSCASR QDMIEACESR NLDLLQKEFP L
|
| Detection Method: | |
| Confidence: | 28.30103 |
| Match: | 2j9qA |
| Description: | No description for 2j9qA was found. |
