| Protein: | PUM3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 964 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUM3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
639.0 | [0..2] | [964..1] |
|
|
534.0 | [0..2] | [953..1] |
|
|
511.0 | [0..607] | [945..2] |
|
|
511.0 | [0..23] | [953..5] |
|
|
507.0 | [0..1] | [945..68] |
|
Region A: Residues: [1-538] |
1 11 21 31 41 51
| | | | | |
1 MMIPELGRRP MHRGNEDSSF GDDYEKEIGV LLGEQQRRQV EADELERELN LYRSGSAPPT 60
61 VDGSLSAAGG LFSGGGGASF LEFGGVNKGN GFGGDDEEFR KDPAYLSYYY ANMKLNPRLP 120
121 PPLMSREDLR VAQRLKGSNN VLGGVGDRRK VNDSRSLFSM PPGFEAGKPG ASASEWDANG 180
181 LIGLGLGGKQ KSFADIFQAD MGHPVVQQPS RPASRNTFDE NVDSNNNLSP SASQGIGAPS 240
241 PYCYAAVLGS SLSRNGTPDP QGIARVPSPC LTPIGSGRVS SNDKRNTSNQ SPFNGVTSGL 300
301 NESSDLVNAL SGLNLSGTGG LDERGQAEQD VEKVRNYMFG LQDGHNEVNP HGFPNRSDQA 360
361 RGTASCRNSQ MRGSQGSAYN SGSGVANPYQ HHDSPNYYAL NPAVASMMAN QLGTNNYSPM 420
421 YENASATLGY SAMDSRLHGG SFVSSGQNLS ESRNIGRVGN RMMEGGTGHP SHLADPMYHQ 480
481 YARFSENADS FDLLNDPSMD RNYGNSYMNM LEIQRAYLGS QKSQYGLPYK SGSPNSHS
|
| Detection Method: |  |
| Confidence: | 13.0 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [539-611] |
1 11 21 31 41 51
| | | | | |
1 YYGSPTFGSN MSYPGSPLAH HGMPNSLMSP YSPMRRGEVN MRYPAATRNY TGGVMGSWHM 60
61 DASLDEGFGS SML
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [612-964] |
1 11 21 31 41 51
| | | | | |
1 EEFKSNKTRG FELSEIAGHV VEFSSDQYGS RFIQQKLETA TTDEKNMVYE EIMPKALALM 60
61 TDVFGNYVIQ KFFEHGLPPQ RRELGEKLID NVLPLSLQMY GCRVIQKAIE VVDLDQKIQM 120
121 VKELDGHVMR CVRDQNGNHV VQKCIECVPE ENIEFIISTF FGHVVTLSTH PYGCRVIQRV 180
181 LEHCHNPDTQ SKVMEEILST VSMLTQDQYG NYVVQHVLEH GKPDERTVII KELAGKIVQM 240
241 SQQKFASNVV EKCLTFGGPE ERELLVNEML GTTDENEPLQ AMMKDQFANY VVQKVLETCD 300
301 DQQRELILTR IKVHLNALKK YTYGKHIVAR VEKLVAAGER RMALQSLPQP LVA
|
| Detection Method: | |
| Confidence: | 145.0 |
| Match: | 1ib2A |
| Description: | Pumilio 1 |
Matching Structure (courtesy of the PDB): |
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