| Protein: | LRKS1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 656 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LRKS1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
523.0 | [0..8] | [646..6] |
|
Region A: Residues: [1-290] |
1 11 21 31 41 51
| | | | | |
1 MSWQWRRRQW PSPLLLILIV LHLVSSSSAI DFLYNSFSSV TNRTDVILIE DSRVESTVIS 60
61 LINDSDPLSF GRVFYPQKLT IIPDPTRNPT RLSSFSTSFV FSILPDISTS PGFGLCFVLS 120
121 NSTSPPNAIS SQYFGLFTNA TVRFNAPLLA VEFDTGRNSE VNDIDDNHVG IDLNNIESTT 180
181 SVTAGYYDSV NGSFVRFNMR NGNNVRAWID FDGPNFQINV SVAPVGVLRP RRPTLTFRDP 240
241 VIANYVSADM YAGFSASKTN WNEARRILAW SLSDTGALRE INTTNLPVFF
|
| Detection Method: |  |
| Confidence: | 29.69897 |
| Match: | 1wblA |
| Description: | Legume lectin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.14600904795604 | bayes_pls_golite062009 |
|
Region A: Residues: [291-656] |
1 11 21 31 41 51
| | | | | |
1 LENSSSSLST GAIAGIVIGC VVFVALIGFG GYLIWKKLMR EEEEEEIEEW ELEFWPHRFS 60
61 YEELAAATEV FSNDRLLGSG GFGKVYRGIL SNNSEIAVKC VNHDSKQGLR EFMAEISSMG 120
121 RLQHKNLVQM RGWCRRKNEL MLVYDYMPNG SLNQWIFDNP KEPMPWRRRR QVINDVAEGL 180
181 NYLHHGWDQV VIHRDIKSSN ILLDSEMRGR LGDFGLAKLY EHGGAPNTTR VVGTLGYLAP 240
241 ELASASAPTE ASDVYSFGVV VLEVVSGRRP IEYAEEEDMV LVDWVRDLYG GGRVVDAADE 300
301 RVRSECETME EVELLLKLGL ACCHPDPAKR PNMREIVSLL LGSPQEDLLT GLTPAAAAAD 360
361 STAAHA
|
| Detection Method: | |
| Confidence: | 73.0 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
