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View Structure Prediction Details

Protein: PHB7_ARATH
Organism: Arabidopsis thaliana
Length: 278 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHB7_ARATH.

Description E-value Query
Range
Subject
Range
gi|33286931, gi|... - gi|41351079|gb|AAH65895.1| Phb protein [Danio rerio], gi|41152028|ref|NP_958454.1| prohibitin [Danio...
226.0 [0..13] [275..3]
PHB_CHICK - Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1
226.0 [0..18] [275..9]
gi|74181431, gi|... - gi|74185218|dbj|BAE30089.1| unnamed protein product [Mus musculus], gi|74181431|dbj|BAE29988.1| unna...
225.0 [0..18] [275..9]
gi|62897923 - gi|62897923|dbj|BAD96901.1| prohibitin variant [Homo sapiens]
224.0 [0..18] [275..9]
gi|89272030, gi|... - gi|89272810|emb|CAJ82042.1| prohibitin [Xenopus tropicalis], gi|89272030|emb|CAJ83243.1| prohibitin ...
224.0 [0..13] [275..4]
gi|60829530 - gi|60829530|gb|AAX36882.1| prohibitin [synthetic construct]
224.0 [0..18] [275..9]
gi|77416945 - gi|77416945|gb|ABA81868.1| unknown [Solanum tuberosum]
223.0 [0..1] [271..1]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVKKVPNVP GSPALSALLK LGVIGGLGLY CIGSSMYNVD GGHRAIVFNR FTGIKDRVYP  60
   61 EGTHFKIPLF ERAIIYDVRS RPYVENSQTG SNDLQTVTIG LRVLTRPMGD RLPEIYRTLG 120
  121 QNYGERVLPS IINETLKAVV AQYNASHLIT QREAVSREIR KIVTERAAKF NIALDDVSIT 180
  181 NLKFGKEFTE AIEKKQVAAQ EAERAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.045757
Match: 1winA
Description: Solution Structure of the Band 7 Domain of the mouse Flotillin 2 Protein
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [207-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FIVEKAEQDK KSAIIRAQGE AKSAQLIGQA IANNEAFITL RKIEAAREIA QTIAKSANKV  60
   61 YLNSSDLLIS KQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle