| Protein: | gi|15230660, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 605 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15230660, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
356.0 | [0..6] | [602..176] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MAGTVVDVRE HGICVDKKKS RVKCNYCGKE MNSFHRLKHH LGAVGTDVTH CDQVSLTLRE 60
61 TFRTMLMEDK SGYTTPKTKR VGKFQMADSR KRRKTEDSSS KSVSPEQGN
|
| Detection Method: |  |
| Confidence: | 1.01 |
| Match: | 1zr9A |
| Description: | Solution Structure of a Human C2H2-type Zinc Finger Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.304205134456748 | bayes_pls_golite062009 |
|
Region A: Residues: [110-605] |
1 11 21 31 41 51
| | | | | |
1 VAVEVDNQDL LSSKAQKCIG RFFYEHCVDL SAVDSPCFKE MMMALGVGQK IPDSHDLNGR 60
61 LLQEAMKEVQ DYVKNIKDSW KITGCSILLD AWIDPKGHDL VSFVADCPAG PVYLKSIDVS 120
121 VVKNDVTALL SLVNGLVEEV GVHNVTQIIA CSTSGWVGEL GKLFSGHDRE VFWSVSLSHC 180
181 FELMLVKIGK MRSFGDILDK VNTIWEFINN NPSALKIYRD QSHGKDITVS SSEFEFVKPY 240
241 LILKSVFKAK KNLAAMFASS VWKKEEGKSV SNLVNDSSFW EAVEEILKCT SPLTDGLRLF 300
301 SNADNNQHVG YIYDTLDGIK LSIKKEFNDE KKHYLTLWDV IDDVWNKHLH NPLHAAGYYL 360
361 NPTSFYSTDF HLDPEVSSGL THSLVHVAKE GQIKIASQLD RYRLGKDCFN EASQPDQISG 420
421 ISPIDWWTEK ASQHPELQSF AIKILSQTCE GASRYKLKRS LAEKLLLTEG MSHCERKHLE 480
481 ELAFVHYNLH LQSCKA
|
| Detection Method: | |
| Confidence: | 43.522879 |
| Match: | 2bw3A |
| Description: | Three-dimensional structure of the Hermes DNA transposase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.722279828632226 | bayes_pls_golite062009 |
| hydrolase activity | 0.29272620969648 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.24934115119652 | bayes_pls_golite062009 |
| nuclease activity | 0.239989310123501 | bayes_pls_golite062009 |
