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View Structure Prediction Details

Protein: CRS2B_ARATH
Organism: Arabidopsis thaliana
Length: 240 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRS2B_ARATH.

Description E-value Query
Range
Subject
Range
CRS2_MAIZE - Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=...
286.0 [0..14] [240..29]

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Predicted Domain #1
Region A:
Residues: [1-240]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCPTYTPSV YHFQTQKPVF RKQRFRVCSS TSGGEDDRFK VEYTPWLIVG LGNPGNKYHG  60
   61 TRHNVGFEMI DVLARKEGVL MNTIQSKALI GIGAIEDVPI LLAKPQTYMN FSGESVGSLA 120
  121 SHYRVPLRHI LMIYDEMALP NGVLRLQPKG GQGYHNGVKS VMGHLDGRRN FPRLSIGIGK 180
  181 PPGNMDMKAF LLQKFSPLEQ KQIEEALEQG SEAVKTLVLN GFNQGISRFN LVQKYKFHKV 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.09691
Match: 1rymA
Description: Structure of the Group II Intron Splicing Factor CRS2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
aminoacyl-tRNA hydrolase activity 2.30458185525664 bayes_pls_golite062009
catalytic activity 1.41033217274476 bayes_pls_golite062009
binding 1.31642757964381 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.904773408466145 bayes_pls_golite062009
protein binding 0.606551407946731 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle