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View Structure Prediction Details

Protein: UTR1_ARATH
Organism: Arabidopsis thaliana
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|111619247, gi... - gi|111619247|ref|ZP_01406261.1| Protein of unknown function DUF6, transmembrane [Acidovorax avenae s...
144.0 [0..37] [318..421]

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Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVHGSGFRR ILLLALCISG IWSAYIYQGV LQETLSTKRF GPDEKRFEHL AFLNLAQSVV  60
   61 CLIWSYIMIK LWSNAGNGGA PWWTYWSAGI TNTIGPAMGI EALKYISYPA QVLAKSSKMI 120
  121 PVMLMGTLVY GIRYTFPEYM CTFLVAGGVS IFALLKTSSK TISKLA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.81
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #2
Region A:
Residues: [167-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPNAPLGYAL CSLNLAFDGF TNATQDSIAS RYPKTEAWDI MLGMNLWGTI YNMIYMFGLP  60
   61 QGIGFKAIQF CKLHPEAAWD ILKYCICGAV GQNFIFMTIS NFGSLANTTI TTTRKFVSIV 120
  121 VSSVMSGNPL SLKQWGCVSM VFGGLAYQIY LKWKKLQRVE KKKQKS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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