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View Structure Prediction Details

Protein: PRP1_ARATH
Organism: Arabidopsis thaliana
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|7620009, gi|2... - gi|7620009|gb|AAF64548.1|AF110985_1 proline-rich protein 1 [Arabidopsis thaliana], pir||T52078 proli...
170.0 [0..1] [335..1]

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Predicted Domain #1
Region A:
Residues: [1-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAITRASFAI CILLSLATIA TADYYAPSSP PVYTSPVNKP TLPPPVYTPP VHKPTLPPPV  60
   61 YTPPVHKPTL SPPVYTKPTL PPPAYTPPVY NKPTLPAPVY TPPVYKPTLS PPVYTKPTLL 120
  121 PPVFKPTLSP PVYTKPTLSP TVYKPTLSPP VNNKPSLSPP VYKPTLSPPV YTKPTLPPPV 180
  181 YKKSPSYSPP PPFAPKPTYT PPTKPYVPEI IKAVGGIILC KN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [223-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYETYPIQGA KAKIVCSERG SYEKSKNEVV IYSDPTDFKG YFHVVLTHIK NLSNCRVKLY  60
   61 TSPVETCKNP TNVNKGLTGV PFSMYSDKNL KLFNVGPFYF TAGSKAAPAT PRY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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